Komurov, K., Tseng, J.T., Muller, M., Seviour E., Moss T., Yang L., Ram, P.T. The glucose-deprivation network counteracts lapatinib-induced toxicity in resistant ErbB2-positive breast cancer cells. Mol Syst Biol, 8:596, 2012
Komurov, K., Dursun, S., Erdin, S., Ram, P.T. NetWalker: a network-based analysis tool for functional genomics. BMC Genomics, 13:282, 2012
Komurov, K. Modeling community-wide molecular networks of multicellular systems. Bioinformatics. 28(5):694-700, 2012
Ward SE, Kim HS, Komurov K, Mendiratta S, Tsai PL, Schmolke M, Satterly N, Manicassamy B, Forst CV, Roth MG, García-Sastre A, Blazewska KM, McKenna CE, Fontoura BM, White MA. Host modulators of H1N1 Cytopathogenicity. PLoS One. 7(8):e39284, 2012
Zhang, L., Komurov, K., Wright, W., Shay, J. Identification of Novel Driver Tumor Suppressors through Functional Interrogation of Putative Passenger Mutations in Colorectal Cancer. Int J Cancer. doi: 10.1002/ijc.27705, 2012
Lu, Y., Muller, M., Smith, D., Dutta, B., Komurov, K., Iadevaia, S., Ruths, D., Tseng, J.T., Yu, S., Yu, Q., Nakhleh, L., Balazsi, G., Donnelly, J., Schurdak, M., Morgan-Lappe, S., Fesik, S., Ram, P.T., Mills, G.B. Kinome siRNA-phosphoproteomic screen identifies networks regulating AKT signaling. Oncogene doi: 10.1038/onc.2011.164, 2011.
Eskiocak, U., Kim, S.B., Ly, P, Roig, A.I., Biglione, S., Komurov, K., Cornelius, C., Wright, W.E., White, M.A., Shay, J.W. Functional parsing of driver mutations in the colorectal cancer genome reveals numerous suppressors of anchorage-independent growth. Cancer Res 71(13):4359-65, 2011.
Matsuo, K., Nishimura, M., Bottsford-Miller, J.N., Huang, J., Komurov, K., Armaiz-Pena, G.N., Shahzad, M.M., Stone, R.L., Roh, J.W., Sanguino, A.M., Lu, C., Im, D.D., Rosenshien, N.B., Sakakibara, A., Nagano, T., Yamasaki, M., Enomoto, T., Kimura, T., Ram, P.T., Schmeler, K.M., Gallick, G.E., Wong, K.K., Frumovitz, M., Sood, A.K. Targeting SRC in mucinous ovarian carcinoma. Clin Cancer Res 15;17(16):5367-78, 2011.
Taube, J.H.*, Herschkowitz, J.I.*, Komurov, K.*, Zhou, A.Y., Gupta, S., Yang, J., Hartwell, K., Onder, T.T., Gupta, P.B., Evans, K.W., Hollier, B.G., Ram, P.T., Lander, E.S., Rosen, J.M., Weinberg, R.A., Mani, S.A. Core epithelial-to-mesenchymal transition interactome gene-expression signature is associated with claudin-low and metaplastic breast cancer subtypes. Proc Natl Acad Sci USA 107(35):15449-54, 2010. (*co-first author)
Komurov, K., White, M.A., Ram, P.T. Use of data-biased random walks on graphs for the retrieval of context-specific networks from genomic data. PLoS Comput Biol. 19;6(8), 2010.
Komurov, K., Padron, D., Cheng, T., Roth, M., Rosenblatt, K.P., White, M.A. Comprehensive mapping of the human kinome to epidermal growth factor receptor signaling. J Biol Chem 2;285(27):21134-42. 2010.
Gopal, Y.N., Deng, W., Woodman, S.E., Komurov, K., Ram, P., Smith, P.D., Davies, M.A. Basal and treatment-induced activation of AKT mediates resistance to cell death by AZD6244 (ARRY-142886) in Braf-mutant human cutaneous melanoma cells. Cancer Res 1;70(21):8736-47, 2010.
Komurov, K., Ram, P.T. Patterns of human gene expression variance show strong associations with signaling network hierarchy. BMC Syst Biol 12;4:154, 2010.
