The Cytogenetics Laboratory at Cincinnati Children's Hospital Medical Center provides a complete listing of FISH probes available for oncology:

Chromosome

Gene Name(s)

1

1p36: EGFL3 or TP73 / 1q25: ANGPTL1 or ABL2

2

2p23-24: N-MYC

2

2p24.1: N-MYC / 2q11: LAF

t(2;5)

2p23: 3' ALK(SO) and 5' ALK(SG)

3

3q26: D3S3364 (SO), EVI1 (SG), D3S3523 (SA)

3

3q27 : 3' BCL6(SG) and 5' BCL6(SO)

4

4q12 : SCFD2 (SG), FIP1L1, LNX (SO) , PDGFRA/KIT (SA)

t(4;14)

4p16 : FGFR3 / 14q32.3 : IgH

5

5p15.2: D5S23 / 5q31: EGR1

5

5p15.2: D5S23 and D5S721 / 5q33-q34: CSF1R

5

5q32: 5' PDGFRβ (SO) and 3' PDGFRβ (SG)

6

6q23 : MYB / 6p11.1-q11.1 (CEP 6): D6Z1

6

6q23 : MYB

7

7q31: D7S522 / 7p11.1-q11.1 (CEP 7): D7Z1

8

8q24: 5' MYC (SO) and 3' MYC (SG)

8

8p11.2: 5' FGFR1 (SO) and 3' FGFR1 (SG) / 8p11.1-q11.1 (CEP 8): D8Z2

t(8;14)

8p11.1q11.1 (CEP 8): D8Z2 / 8q24: MYC / 14q32.3 : IGH

t(8;21)

8q22: ETO / 21q22: AML1

9

9p21: p16 / 9p11.1-q11.1: CEP 9

9

9q34: ASS

t(9;22)

9q34: ABL1 22q11.2: BCR

10

10q23: PTEN 10p11.1-q11.1 : CEP 10

11

11q23: 5' MLL(SG) and 3' MLL(SO)

t(11;14)

11q13: CCND1 /MYEOV / 14q32.3 : IGH

11/17

11q22.3: ATM / 17p13.1: p53

t(11;18)

11q21 : API2 / 18q21 : MALT1

12

12q13: 5'DDIT3(SO) and 3'DDIT3 (SG)

12

12p13: 5' ETV6(SO) and 3' ETV6(SG)

t(12;21)

12p13: TEL / 21q22: AML1

12/13

12q11.1-q11: CEP 12 (D12Z3) / 13q14.3: D13S319 / 13q34: D13S1020 (LAMP1)

13

13q14 : RB1

13

13q14.3 : D13S319

13

13q14: 5' FOXO1(SO) and 3' FOXO1(SG)

13

13q34: D13S1020 (LAMP1)

14

14q32.3 : IGHV(SG) and IGH 3' flanking genes (SO)

14

14q11.2: 5'TCR(SO) and 3'TCR(SG)

t(14;16)

14q32.3 : IGH / 16q23 : MAF

t(14;18)

14q32.3 : IGH / 18q21: BCL2

t(14;18)

14q32.3 : IGH / 18q21 : MALT1

t(15;17)

15q22: PML / 17q12-21: RARA

16

16p11: 5'FUS(SG) and 3'FUS(SO)

16

16q22: 5'CBFB(SO) and 3'CBFB(SG)

16

16p13: MYH11(SG) / 16q22: CBFB(SO)

17

17p13.1: p53

17

1721 : 5' RARA(SO) and 3' RARA(SG)

18

18q21: 5'MALT1(SO) and 3'MALT1(SG)

18

18q11.2 : 5'SYT(SO) and 3'SYT(SG)

19

19p13:ZNF44, ZK1 or MAN2B1 / 19q13:GLTSCR1, GLTSCR2 or CRX

19

19p13: 5'TCF3(SG) and 3'TCF3(SO)

19

19p13: (D19S883) (SG), 5' E2A (SO)

20

20q12: D20S108

21

21q22.13-q22.2: D21S259, D21S341 or D21S342

22

22q11.2: BCR

22

22q12: 5'EWSR1(SO) and 3' EWSR1(SG)

Sex Mismatched BMT

Xp11.1q11.1 (CEP X) : DXZ1 / Yq12 (CEP Y) : DYZ1