Allergy and Immunology

Publications

Abi-Melhem, R; Hassoun, Y. Is pea our hidden allergen? An American pediatric case series. 2023; 2:100090.

Aknin, E; Larey, A; Caldwell, JM; Collins, MH; Rothenberg, ME; Savir, Y. (2023) Harnessing Digital Pathology And Causal Learning To Improve Eosinophilic Esophagitis Dietary Treatment Assignment. Institute of Electrical and Electronics Engineers (IEEE). 00:1-8.

Alvarado, D; Lu, Y; Shoda, T; Caldwell, JM; Keler, T; Rothenberg, ME. Strong association of mast cells with eosinophilic esophagitis-specific signatures. Allergy: European Journal of Allergy and Clinical Immunology. 2023; 78:583-586.

Applequist, J; Burroughs, C; Merkel, PA; Rothenberg, M; Trapnell, B; Desnick, R; Sahin, M; Krischer, J. Direct-to-Consumer Recruitment Methods via Traditional and Social Media to Aid in Research Accrual for Clinical Trials for Rare Diseases: Comparative Analysis Study. Journal of Medical Internet Research. 2023; 25:e39262.

Arimoto, KI; Miyauchi, S; Troutman, TD; Zhang, Y; Liu, M; Stoner, SA; Davis, AG; Fan, JB; Huang, YJ; Yan, M; et al. Expansion of interferon inducible gene pool via USP18 inhibition promotes cancer cell pyroptosis. Nature Communications. 2023; 14:251.

Avlas, S; Shani, G; Rhone, N; Itan, M; Dolitzky, A; Hazut, I; Grisaru-Tal, S; Gordon, Y; Shoda, T; Ballaban, A; et al. Epithelial cell-expressed type II IL-4 receptor mediates eosinophilic esophagitis. Allergy: European Journal of Allergy and Clinical Immunology. 2023; 78:464-476.

Bedard, MC; Chihanga, T; Carlile, A; Jackson, R; Brusadelli, MG; Lee, D; VonHandorf, A; Rochman, M; Dexheimer, PJ; Chalmers, J; et al. Single cell transcriptomic analysis of HPV16-infected epithelium identifies a keratinocyte subpopulation implicated in cancer. Nature Communications. 2023; 14:1975.

Ben-Baruch Morgenstern, N; Shoda, T; Rochman, Y; Caldwell, JM; Collins, MH; Mukkada, V; Putnam, PE; Bolton, SM; Felton, JM; Rochman, M; et al. Local type 2 immunity in eosinophilic gastritis. Journal of Allergy and Clinical Immunology. 2023; 152:136-144.

Bennett, H; Troutman, TD; Zhou, E; Spann, NJ; Link, VM; Seidman, JS; Nickl, CK; Abe, Y; Sakai, M; Pasillas, MP; et al. Discrimination of cell-intrinsic and environment-dependent effects of natural genetic variation on Kupffer cell epigenomes and transcriptomes. Nature Immunology. 2023; 24:1825-1838.

Bird, JA; Nilsson, C; Brown, K; Pham, T; Tilles, S; du Toit, G; Assa'ad, A. Long-term safety and immunologic outcomes of daily oral immunotherapy for peanut allergy. 2023; 2:100120.

Bousquet, J; Melén, E; Haahtela, T; Koppelman, GH; Togias, A; Valenta, R; Akdis, CA; Czarlewski, W; Rothenberg, M; Valiulis, A; et al. Rhinitis associated with asthma is distinct from rhinitis alone: The ARIA-MeDALL hypothesis. Allergy: European Journal of Allergy and Clinical Immunology. 2023; 78:1169-1203.

Brusilovsky, M; Rochman, M; Shoda, T; Kotliar, M; Caldwell, JM; Mack, LE; Besse, JA; Chen, X; Weirauch, MT; Barski, A; et al. Vitamin D receptor and STAT6 interactome governs oesophageal epithelial barrier responses to IL-13 signalling. Gut. 2023; 72:834-845.

Cazares, TA; Rizvi, FW; Iyer, B; Chen, X; Kotliar, M; Bejjani, AT; Wayman, JA; Donmez, O; Wronowski, B; Parameswaran, S; et al. maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks. Editor, Przytycka TM. PLoS Computational Biology. 2023; 19:e1010863.

Chang, JW; Kliewer, K; Haller, E; Lynett, A; Doerfler, B; Katzka, DA; Peterson, KA; Dellon, ES; Gonsalves, N; Aceves, SS; et al. Development of a Practical Guide to Implement and Monitor Diet Therapy for Eosinophilic Esophagitis. Clinical Gastroenterology and Hepatology. 2023; 21:1690-1698.

Chehade, M; Furuta, G; Klion, A; Abonia, JP; Aceves, S; Bose, P; Collins, MH; Davis, C; Dellon, ES; Eickel, G; et al. Enhancing diversity, equity, inclusion, and accessibility in eosinophilic gastrointestinal disease research: the consortium for eosinophilic gastrointestinal disease researchers' journey. Therapeutic Advances in Rare Disease. 2023; 4:26330040231180895.

Chehade, M; Wright, BL; Atkins, D; Aceves, SS; Ackerman, SJ; Assa'ad, AH; Bauer, M; Collins, MH; Commins, SP; Davis, CM; et al. Breakthroughs in understanding and treating eosinophilic gastrointestinal diseases presented at the CEGIR/TIGERs Symposium at the 2022 American Academy of Allergy, Asthma & Immunology Meeting. Journal of Allergy and Clinical Immunology. 2023; 152:1382-1393.

Dellon, ES; Rothenberg, ME; Bredenoord, AJ. Dupilumab in Patients with Eosinophilic Esophagitis. Reply. The New England journal of medicine. 2023; 388:956-957.

Dellon, ES; Rothenberg, ME; Collins, MH; Hirano, I; Chehade, M; Bredenoord, AJ; Lucendo, AJ; Spergel, JM; Sun, X; Hamilton, JD; et al. Dupilumab efficacy and safety up to 52weeks in adult and adolescent patients with eosinophilic esophagitis: Results from parts B and C of the randomized, placebo-controlled, three-part, phase 3 LIBERTY EoE TREET Study. Revue Française d'Allergologie et d'Immunologie Clinique. 2023; 63:103594.

Devonshire, A; Gautam, Y; Johansson, E; Mersha, TB. Multi-omics profiling approach in food allergy. World Allergy Organization Journal. 2023; 16:100777.

Dileep, A; Warren, C; Bilaver, LA; Stephen, E; Andy-Nweye, AB; Fox, S; Jiang, J; Newmark, PJ; Chura, A; Abdikarim, I; et al. Assessing Disparities in the Prevalence of Atopic Comorbidities Among Food-Allergic Children. Journal of Allergy and Clinical Immunology: In Practice. 2023; 11:1169-1176.

Furuta, GT; Fillon, SA; Williamson, KM; Robertson, CE; Stevens, MJ; Aceves, SS; Arva, NC; Chehade, M; Collins, MH; Davis, CM; et al. Mucosal Microbiota Associated With Eosinophilic Esophagitis and Eosinophilic Gastritis. Journal of Pediatric Gastroenterology and Nutrition. 2023; 76:347-354.

Gautam, Y; Caldwell, J; Kottyan, L; Chehade, M; Dellon, ES; Rothenberg, ME; Mersha, TB; Wechsler, J; Davis, C; Furuta, G; et al. Genome-wide admixture and association analysis identifies African ancestry-specific risk loci of eosinophilic esophagitis in African Americans. Journal of Allergy and Clinical Immunology. 2023; 151:1337-1350.

Gill, K; Moore, C; Nwogu, O; Kroner, JW; Chang, W; Stevens, ML; Kyzy, AB; Biagini, JM; Devonshire, AL; Kottyan, L; et al. B cell repertoire in children with skin barrier dysfunction supports altered IgE maturation associated with allergic food sensitization. 2023; 4:2023.02.01.526538.

Gonsalves, N; Doerfler, B; Zalewski, A; Yang, GY; Martin, LJ; Zhang, X; Shoda, T; Brusilovsky, M; Aceves, S; Thompson, K; et al. Prospective study of an amino acid-based elemental diet in an eosinophilic gastritis and gastroenteritis nutrition trial. Journal of Allergy and Clinical Immunology. 2023; 152:676-688.

Guarnieri, KM; Saba, NK; Schwartz, JT; Devonshire, AL; Bufford, J; Casale, TB; Rothenberg, ME; Andorf, S. Food Allergy Characteristics Associated With Coexisting Eosinophilic Esophagitis in FARE Registry Participants. Journal of Allergy and Clinical Immunology: In Practice. 2023; 11:1509-1521.e6.

Gupta, RS; Sehgal, S; Wlodarski, M; Bilaver, LA; Wehbe, FH; Spergel, JM; Wang, J; Ciaccio, CE; Nimmagadda, SR; Assa'ad, A; et al. Accelerating Food Allergy Research: Need for a Data Commons. Journal of Allergy and Clinical Immunology: In Practice. 2023; 11:1063-1067.

Hirano, I; Rothenberg, ME; Zhang, S; De Oliveira, C; Charriez, CM; Coyne, KS; Bacci, ED; Dellon, ES. Dysphagia Days as an Assessment of Clinical Treatment Outcome in Eosinophilic Esophagitis. The American Journal of Gastroenterology (Elsevier). 2023; 118:744-747.

Hiremath, G; Sun, L; Collins, MH; Bonis, PA; Arva, NC; Capocelli, KE; Chehade, M; Davis, CM; Falk, GW; Gonsalves, N; et al. Esophageal Epithelium and Lamina Propria Are Unevenly Involved in Eosinophilic Esophagitis. Clinical Gastroenterology and Hepatology. 2023; 21:2807-2816.e3.

Huang, FS; Mangeot, C; Sucharew, H; Simon, K; Courter, J; Risma, K; Schaffzin, JK. Beta-Lactam Allergy Association with Surgical Site Infections in Pediatric Procedures: A Matched Cohort Study. Journal of the Pediatric Infectious Diseases Society. 2023; 12:123-127.

Hwee, J; Huynh, L; Du, S; Kwon, N; Jakes, RW; Alfonso-Cristancho, R; Baylis, L; Requena, G; Khanal, A; Rothenberg, ME; et al. Hypereosinophilic syndrome in Europe: Retrospective study of treatment patterns, clinical manifestations, and healthcare resource utilization. Annals of Allergy, Asthma, and Immunology. 2023; 130:768-775.

Keet, C; Sicherer, SH; Bunyavanich, S; Visness, C; Fulkerson, PC; Togias, A; Davidson, W; Perry, S; Hamrah, S; Calatroni, A; et al. The SunBEAm birth cohort: Protocol design. 2023; 2:100124.

Kliewer, KL; Gonsalves, N; Dellon, ES; Katzka, DA; Abonia, JP; Aceves, SS; Arva, NC; Besse, JA; Bonis, PA; Caldwell, JM; et al. One-food versus six-food elimination diet therapy for the treatment of eosinophilic oesophagitis: a multicentre, randomised, open-label trial. The Lancet Gastroenterology and Hepatology. 2023; 8:408-421.

Kliewer, KL; Murray-Petzold, C; Collins, MH; Abonia, JP; Bolton, SM; DiTommaso, LA; Martin, LJ; Zhang, X; Mukkada, VA; Putnam, PE; et al. Benralizumab for eosinophilic gastritis: a single-site, randomised, double-blind, placebo-controlled, phase 2 trial. The Lancet Gastroenterology and Hepatology. 2023; 8:803-815.

Maezawa, S; Yukawa, M; Hasegawa, K; Sugiyama, R; Iizuka, M; Hu, M; Sakashita, A; Vidal, M; Koseki, H; Barski, A; et al. PRC1 suppresses a female gene regulatory network to ensure testicular differentiation. Cell Death and Disease. 2023; 14:501.

Mahdavinia, M; Fyolek, JP; Jiang, J; Thivalapill, N; Bilaver, LA; Warren, C; Fox, S; Nimmagadda, SR; Newmark, PJ; Sharma, H; et al. Gut microbiome is associated with asthma and race in children with food allergy. Journal of Allergy and Clinical Immunology. 2023; 152:1541-1549.e1.

McWilliam, V; Netting, MJ; Volders, E; Palmer, DJ; Ansotegui, I; Arasi, S; Assa'ad, AH; Bahna, SL; Canani, RB; Bognanni, A; et al. World Allergy Organization (WAO) Diagnosis and Rationale for Action against Cow's Milk Allergy (DRACMA) guidelines update - X - Breastfeeding a baby with cow's milk allergy. World Allergy Organization Journal. 2023; 16:100830.

Melén, E; Lambrecht, BN; Lloyd, CM; Rothenberg, ME; Kabashima, K; Luciani, F; Coquet, JM; Ober, C; Nawijn, MC; Platts-Mills, T; et al. A conversation on allergy: recognizing the past and looking to the future. Immunology and Cell Biology. 2023; 101:936-946.

Parsons, ES; Liu, F; Kaushik, A; Lee, A; Schuetz, J; Dunham, D; Seastedt, H; Ogulur, I; Heider, A; Tan, G; et al. Detection of gut and mucosal peptides through TOMAHAQ in healthy individuals. Allergy: European Journal of Allergy and Clinical Immunology. 2023; 78:2052-2055.

Ramos, A; Warren, C; Herbert, L; Pappalardo, AA; Engel, M; Sharma, H; Assa'ad, A; Mahdavinia, M; Bilaver, L; DunnGalvin, A; et al. Validation of the Food Allergy Quality of Life Questionnaire (FAQLQ-PF10) Short Form in a diverse US sample. Journal of Allergy and Clinical Immunology: In Practice. 2023; 11:2239-2241.

Rochman, M; Rochman, Y; Caldwell, JM; Mack, LE; Besse, JA; Manes, NP; Yoon, SH; Shoda, T; Nita-Lazar, A; Rothenberg, ME. The minichromosome maintenance complex drives esophageal basal zone hyperplasia. JCI insight. 2023; 8:e172143.

Rochman, Y; Kotliar, M; Morgenstern, NB B; Barski, A; Wen, T; Rothenberg, ME. TSLP shapes the pathogenic responses of memory CD4+ T cells in eosinophilic esophagitis. Science Signaling. 2023; 16:eadg6360.

Rothenberg, ME. The immunology that underlies picky eating. Nature. 2023; 620:497-499.

Rothenberg, ME; Bousquet, J. News beyond our pages. Journal of Allergy and Clinical Immunology. 2023; 151:679-680.

Rothenberg, ME; Bousquet, J. News beyond our pages. Journal of Allergy and Clinical Immunology. 2023; 151:405-406.

Rothenberg, ME; Bousquet, J. News beyond our pages. Journal of Allergy and Clinical Immunology. 2023; 151:104-105.

Rothenberg, ME; Dellon, ES; Collins, MH; Hirano, I; Chehade, M; Bredenoord, AJ; Lucendo, AJ; Spergel, JM; Sun, X; Hamilton, JD; et al. Efficacy and safety of dupilumab up to 52 weeks in adults and adolescents with eosinophilic oesophagitis (LIBERTY EoE TREET study): a multicentre, double-blind, randomised, placebo-controlled, phase 3 trial. The Lancet Gastroenterology and Hepatology. 2023; 8:990-1004.

Rubeiz, C; Bernstein, J. Analysis of Questionnaire Survey to Determine Worldwide Trends in Prescriptions of Biologics for the Treatment of Unresponsive Chronic Spontaneous Urticaria. Journal of Allergy and Clinical Immunology. 2023; 151:ab143.

Sato, H; Osonoi, K; Sharlin, CS; Shoda, T. Genetic and Molecular Contributors in Eosinophilic Esophagitis. Current Allergy and Asthma Reports. 2023; 23:255-266.

Shao, TY; Jiang, TT; Stevens, J; Russi, AE; Troutman, TD; Bernieh, A; Pham, G; Erickson, JJ; Eshleman, EM; Alenghat, T; et al. Kruppel-like factor 2+ CD4 T cells avert microbiota-induced intestinal inflammation. Cell Reports. 2023; 42:113323.

Shoda, T; Rochman, M; Collins, MH; Caldwell, JM; Mack, LE; Osswald, GA; Mukkada, VA; Putnam, PE; Rothenberg, ME. Molecular analysis of duodenal eosinophilia. Journal of Allergy and Clinical Immunology. 2023; 151:1027-1039.

Siddiqui, S; Wenzel, SE; Bozik, ME; Archibald, DG; Dworetzky, SI; Mather, JL; Killingsworth, R; Ghearing, N; Schwartz, JT; Ochkur, SI; et al. Safety and Efficacy of Dexpramipexole in Eosinophilic Asthma (EXHALE): A randomized controlled trial. Journal of Allergy and Clinical Immunology. 2023; 152:1121-1130.e10.

Sindher, SB; Barshow, S; Tirumalasetty, J; Arasi, S; Atkins, D; Bauer, M; Bégin, P; Collins, MH; Deschildre, A; Doyle, AD; et al. The role of biologics in pediatric food allergy and eosinophilic gastrointestinal disorders. Journal of Allergy and Clinical Immunology. 2023; 151:595-606.

Soh, WT; Zhang, J; Hollenberg, MD; Vliagoftis, H; Rothenberg, ME; Sokol, CL; Robinson, C; Jacquet, A. Protease allergens as initiators-regulators of allergic inflammation. Allergy: European Journal of Allergy and Clinical Immunology. 2023; 78:1148-1168.

Stefan, K; Barski, A. Cis-regulatory atlas of primary human CD4+ T cells. BMC Genomics. 2023; 24:253.

Talley, NJ; Peterson, KA; Genta, RM; Chang, AT; Dellon, ES; Sandborn, WJ; Lacy, BE; Chehade, M; Hirano, I; Gonsalves, N; et al. High Discovery Rate of Duodenal and Gastric Eosinophilia in Patients With Unexplained Moderate-Severe Abdominal Symptoms: A Prospective US Multisite Study. Gastroenterology. 2023; 164:680-683.e2.

Troutman, TD; Glass, CK. Gene-by-environment regulation of Kupffer cell transcriptomes and epigenomes. Nature Immunology. 2023; 24:1797-1798.

Uchida, AM; Burk, CM; Rothenberg, ME; Furuta, GT; Spergel, JM. Recent Advances in the Treatment of Eosinophilic Esophagitis. Journal of Allergy and Clinical Immunology: In Practice. 2023; 11:2654-2663.

Underwood, B; Troutman, TD; Schwartz, JT. Breaking down the complex pathophysiology of eosinophilic esophagitis. Annals of Allergy, Asthma, and Immunology. 2023; 130:28-39.

Wayman, JA; Thomas, A; Bejjani, A; Katko, A; Almanan, M; Godarova, A; Korinfskaya, S; Cazares, TA; Yukawa, M; Kottyan, LC; et al. An atlas of gene regulatory networks for memory CD4 + T cells in youth and old age. 2023; 4:2023.03.07.531590.

Xu, J; Cai, H; Wu, Z; Li, X; Tian, C; Ao, Z; Niu, VC; Xiao, X; Jiang, L; Khodoun, M; et al. Acoustic metamaterials-driven transdermal drug delivery for rapid and on-demand management of acute disease. Nature Communications. 2023; 14:869.

Zhou, ZH; Cortese, MM; Fang, JL; Wood, R; Hummell, DS; Risma, KA; Norton, AE; KuKuruga, M; Kirshner, S; Rabin, RL; et al. Evaluation of association of anti-PEG antibodies with anaphylaxis after mRNA COVID-19 vaccination. Vaccine. 2023; 41:4183-4189.