Biomedical Informatics

Publications

Abdullah, S; Leever, G; Langenberg, L; Luebbering, N; Roskin, K; Webster, A; Jodele, S; Davies, SM; Sabulski, DA. Intra- and Inter-Organ Endothelial Cell Differences Contribute to TA-TMA through HMOX1, Hypoxia and Reactive Oxygen Species Signaling. Transplantation and Cellular Therapy. 2024; 30:s142.

Bedolla, A; Wegman, E; Weed, M; Stevens, MK; Ware, K; Paranjpe, A; Alkhimovitch, A; Ifergan, I; Taranov, A; Peter, JD; McClain, L; Roskin, KM; Greig, NH; Luo, Y. Adult microglial TGFβ1 is required for microglia homeostasis via an autocrine mechanism to maintain cognitive function in mice. Nature Communications. 2024; 15:5306.

Bezrookove, V; Khan, I; Bhattacharjee, A; Fan, J; Jones, R; Sharma, A; Nosrati, M; Desprez, PY; Salomonis, N; Shi, Y; Dar, A; Kashani-Sabet, M. miR-876-3p is a tumor suppressor on 9p21 that is inactivated in melanoma and targets ERK. Journal of Translational Medicine. 2024; 22:758.

Bhatnagar, S; Mitelpunkt, A; Rizzo, JJ; Zhang, N; Guzman, T; Schuetter, R; Vargus-Adams, J; Bailes, AF; Greve, K; Gerstle, M; Pedapati, E; Aronow, B; Kurowski, BG. Mental Health Diagnoses Risk Among Children and Young Adults With Cerebral Palsy, Chronic Conditions, or Typical Development. JAMA network open. 2024; 7:e2422202.

Boch, S; Wildeman, C; Dexheimer, J; Kahn, R; Lambert, J; Beal, S. Pediatric Health and System Impacts of Mass Incarceration, 2009-2020: A Matched Cohort Study. Academic Pediatrics. 2024; 24:1285-1295.

Boudissa, S; Debsarkar, SS; Kawanaka, H; Aronow, B; Prasath, VB S. Vision Transformers and CNN-Based Knowledge-Distillation for Histopathological Image Classification. Fuzzy Systems and Data Mining X. : IOS Press; IOS Press; 2024.

Clark, J; Wunderlich, M; Chen, J; Starczynowski, D; Lee, L. Abstract A017: IGF2BP1 is essential for ETO2/GLIS2 leukemogenesis via stabilization of primitive myeloid transcriptional programs. Molecular Cancer Therapeutics. 2024; 23:a017.

Desai, DA; Baby, A; Ananthamohan, K; Green, LC; Arif, M; Duncan, BC; Kumar, M; Singh, RR; Koch, SE; Natesan, S; Rubinstein, J; Jegga, AG; Sadayappan, S. Roles of cMyBP-C phosphorylation on cardiac contractile dysfunction in db/db mice. 2024; 8:100075.

DeVeaux, SA; Vyshnya, S; Propsom, K; Gbotosho, OT; Singh, AS; Horning, RZ; Sharma, M; Jegga, AG; Niu, L; Botchwey, EA; Hyacinth, HI. Neuroinflammation underlies the development of social stress induced cognitive deficit in male sickle cell mice. Experimental biology and medicine (Maywood, N.J.). 2024; 249:10361.

DeVore, SB; Schuetz, M; Alvey, L; Lujan, H; Ochayon, DE; Williams, L; Chang, WC; Filuta, A; Ruff, B; Kothari, A; Keles, S; Milner, JD; Supp, DM; Khurana Hershey, GK. Regulation of MYC by CARD14 in human epithelium is a determinant of epidermal homeostasis and disease. Cell Reports. 2024; 43:114589.

Dhaubhadel, S; Ganguly, K; Ribeiro, RM; Cohn, JD; Hyman, JM; Hengartner, NW; Kolade, B; Singley, A; Bhattacharya, T; Finley, P; Yang, R; Yoo, S; Zhao, H; McMahon, BH. High dimensional predictions of suicide risk in 4.2 million US Veterans using ensemble transfer learning. Scientific Reports. 2024; 14:1793.

Eshleman, EM; Rice, T; Potter, C; Waddell, A; Hashimoto-Hill, S; Woo, V; Field, S; Engleman, L; Lim, HW; Schumacher, MA; Frey, MR; Denson, LA; Finkelman, FD; Alenghat, T. Microbiota-derived butyrate restricts tuft cell differentiation via histone deacetylase 3 to modulate intestinal type 2 immunity. Immunity. 2024; 57:319-332.e6.

Feng, Y; Cai, L; Pook, M; Liu, F; Chang, CH; Mouti, MA; Nibhani, R; Militi, S; Dunford, J; Philpott, M; Wang, Y; Huang, W; Jiang, L; Pauklin, S. BRD9-SMAD2/3 Orchestrates Stemness and Tumorigenesis in Pancreatic Ductal Adenocarcinoma. Gastroenterology. 2024; 166:139-154.

Gaddis, N; Fortriede, J; Guo, M; Bardes, EE; Kouril, M; Tabar, S; Burns, K; Ardini-Poleske, ME; Loos, S; Schnell, D; Xu, Y; Tickle, T; Aronow, BJ; Salomonis, N. LungMAP Portal Ecosystem: Systems-level Exploration of the Lung. American Journal of Respiratory Cell and Molecular Biology. 2024; 70:129-139.

Ghandikota, SK; Jegga, AG. Application of artificial intelligence and machine learning in drug repurposing. Progress in Molecular Biology and Translational Science. : Elsevier; Elsevier; 2024.

Gutfreund, MC; Kobayashi, T; Callado, GY; Pardo, I; Hsieh, MK; Lin, V; Perencevich, EN; Salinas, JL; Edmond, MB; Mendonça, E; Rizzo, LV; Marra, AR. The effectiveness of the COVID-19 vaccines in the prevention of post-COVID conditions in children and adolescents: a systematic literature review and meta-analysis. Antimicrobial Stewardship and Healthcare Epidemiology. 2024; 4:e54.

Heneghan, JA; Walker, SB; Fawcett, A; Bennett, TD; Dziorny, AC; Sanchez-Pinto, LN; Farris, RW D; Winter, MC; Badke, C; Martin, B; Mendonca, EA; Markovitz, BP; Mayampurath, A; Spaeder, MC. The Pediatric Data Science and Analytics Subgroup of the Pediatric Acute Lung Injury and Sepsis Investigators Network: Use of Supervised Machine Learning Applications in Pediatric Critical Care Medicine Research. Pediatric Critical Care Medicine. 2024; 25:364-374.

Herr, K; Lu, P; Diamreyan, K; Xu, H; Mendonca, E; Weaver, KN; Chen, J. Estimating prevalence of rare genetic disease diagnoses using electronic health records in a children's hospital. Human Genetics and Genomics Advances. 2024; 5:100341.

Hirsch, AG; Conderino, S; Crume, TL; Liese, AD; Bellatorre, A; Bendik, S; Divers, J; Anthopolos, R; Dixon, BE; Guo, Y; Shao, H; Utidjian, L; Thorpe, LE; DiCAYA Study Group, . Using electronic health records to enhance surveillance of diabetes in children, adolescents and young adults: a study protocol for the DiCAYA Network. BMJ Open. 2024; 14:e073791.

Honaker, SM; Grout, RW; Hillstrom, J; Downs, SM; Mendonca, E. Clinical decision support for primary care pediatric OSA detection. Sleep Medicine. 2024; 115:267.

Huang, B; Kouril, M; Chen, C; Daraiseh, NM; Ferraro, K; Mannion, ML; Brunner, HI; Lovell, DJ; Morgan, EM. Digital health technology to support patient-centered shared decision making at point of care for juvenile idiopathic arthritis. Frontiers in Pediatrics. 2024; 12:1457538.

Huber, J; Dexheimer, J; Vaughn, L; Wall, J; O'Connor, G; Badia, P; Davies, SM; Dandoy, DC E. HSCT Patient and Family Education Concept Identification. Transplantation and Cellular Therapy. 2024; 30:s344-s345.

Inoue, SI; Emmett, MJ; Lim, HW; Midha, M; Richter, HJ; Celwyn, IJ; Mehmood, R; Chondronikola, M; Klein, S; Hauck, AK; Lazar, MA. Short-term cold exposure induces persistent epigenomic memory in brown fat. Cell Metabolism. 2024; 36:1764-1778.e9.

Kanbar, L; Osborn, AK; Cifuentes, A; Combs, J; Sorter, MT; Dexheimer, JW; Barzman, DH. 3.4 What Matters Most: A Machine Learning Approach to Identify the Most Important Questions in the Automated Risk Assessment of School Violence. Journal of the American Academy of Child and Adolescent Psychiatry. 2024; 63:s206-s207.

Kanbar, LJ; Mishra, A; Osborn, A; Cifuentes, A; Combs, J; Sorter, M; Barzman, D; Dexheimer, JW. Investigation of bias in the automated assessment of school violence. Journal of Biomedical Informatics. 2024; 157:104709.

Kelleher, M; Kinnear, B; Weber, DE; Knopp, MI; Schumacher, D; Warm, E. Point/counterpoint: Should we stop writing and reading letters of recommendation for residency selection?. Journal of hospital medicine (Online). 2024; 19:858-862.

Krishnan, JM; Roskin, KM; Meeds, HL; Blackard, JT. Effect of fentanyl on HIV expression in peripheral blood mononuclear cells. Frontiers in Microbiology. 2024; 15:1463441.

Kumar, A; Mark, ZF; Carbajal, MP; DeLima, DS; Chamberlain, N; Walzer, J; Ruban, M; Chandrasekaran, R; Daphtary, N; Aliyeva, M; Britto, CJ; Dela Cruz, CS; Jegga, AG; Anathy, V. The protein disulfide isomerase A3 and osteopontin axis promotes influenza-induced lung remodelling. British Journal of Pharmacology. 2024; 181:4610-4627.

Kurowski, BG; Treble-Barna, A; Pilipenko, V; Martin, LJ; Jegga, AG; Miley, AE; Zhang, N; Fabio, A; Chima, RS; Adlam, AL R; Kaufman, K; Bell, MJ; Beers, SR; Wisniewski, SR; Wade, SL. Elucidating a genomic signature associated with behavioral and executive function after moderate to severe pediatric TBI: a systems biology informed approach. Frontiers in Systems Biology. 2024; 4:1293265.

Lee, TM; Miller, E; Sridhar, A; Fan, X; Dexheimer, PJ; Bansal, N; Godown, J; Hsu, DT; Kantor, P; Kirmani, S; Ware, SM; Chung, WK; Wilkinson, JD; Lipshultz, SE. Pediatric cardiomyopathy illustrates the importance of reinterpreting the significance of genetic variants. Progress in Pediatric Cardiology. 2024; 74:101732.

Lee, Y; Kim, KH; Park, J; Kang, HM; Kim, SH; Jeong, H; Lee, B; Lee, N; Cho, Y; Kim, GD; Aronow, BJ; Lim, KM; Coffey, RJ; Nam, KT. Regenerative Role of Lrig1+ Cells in Kidney Repair. Journal of the American Society of Nephrology : JASN. 2024; 35:1702-1714.

Lehmann, CU; Adams, WG; Chaparro, JD; Fiks, AG; Grout, RW; Leu, MG; Mendonca, EA; Michel, JJ; Okechukwu, K; Salmon, J; Sharifi, M; Downs, SM. Better Guidelines and Policies: AAP's Partnership for Policy Implementation. Pediatrics. 2024; 154:e2023061360.

Li, G; Mahajan, S; Ma, S; Jeffery, ED; Zhang, X; Bhattacharjee, A; Venkatasubramanian, M; Weirauch, MT; Miraldi, ER; Grimes, HL; Sheynkman, GM; Tilburgs, T; Salomonis, N. Splicing neoantigen discovery with SNAF reveals shared targets for cancer immunotherapy. Science Translational Medicine. 2024; 16:eade2886.

Li, G; Salomonis, N. RNA Isoforms as Broad Targets for Cancer Immunotherapy. DNA and Cell Biology. 2024; 43:363-368.

Li, G; Schnell, D; Bhattacharjee, A; Yarmarkovich, M; Salomonis, N. Quantifying tumor specificity using Bayesian probabilistic modeling for drug and immunotherapeutic target discovery. Cell Reports: Methods. 2024; 4:100900.

Li, Y; Devonshire, A; Huang, B; Andorf, S. Risk subgroups and intervention effects among infants at high risk for peanut allergy: A model for clinical decision making. Clinical and Experimental Allergy. 2024; 54:185-194.

Liu, X; Prasath, S; Siddiqui, I; Walters, TD; Denson, LA; Hyams, JS; Kugathasan, S; Griffiths, AM; Collins, MH; Baldassano, RN; Sudel, B; Wali, P; Ziring, D; Dhaliwal, J. Machine Learning-Based Prediction of Pediatric Ulcerative Colitis Treatment Response Using Diagnostic Histopathology. Gastroenterology. 2024; 166:921-924.e4.

Liu, X; Reigle, J; Prasath, VB S; Dhaliwal, J. Artificial intelligence image-based prediction models in IBD exhibit high risk of bias: A systematic review. Computers in Biology and Medicine. 2024; 171:108093.

Luebbering, N; Abdullah, S; Roskin, K; Webster, A; Blackard, JT; Odegard, E; Laskin, B; Seif, AE; Jodele, S; Davies, SM; Sabulski, DA. Single Cell Rnaseq Identifies Chemokine Responses to BK Polyomavirus Infection and Novel Contribution of MAIT Cells. Transplantation and Cellular Therapy. 2024; 30:s84.

Manakkat Vijay, GK; Zhou, M; Thakkar, K; Rothrauff, A; Chawla, AS; Chen, D; Lau, LC W; Gerges, PH; Chetal, K; Chhibbar, P; Borghesi, L; Salomonis, N; Xu, H; Singh, H. Temporal dynamics and genomic programming of plasma cell fates. Nature Immunology. 2024; 25:1097-1109.

Matsui, S; Granitto, M; Buckley, M; Ludwig, K; Koigi, S; Shiley, J; Zacharias, WJ; Mayhew, CN; Lim, HW; Iwafuchi, M. Pioneer and PRDM transcription factors coordinate bivalent epigenetic states to safeguard cell fate. Molecular Cell. 2024; 84:476-489.e10.

Matsui, S; Shiley, JR; Buckley, M; Lim, HW; Hu, YC; Mayhew, CN; Iwafuchi, M. Protocol for establishing inducible CRISPRd system for blocking transcription factor-binding sites in human pluripotent stem cells. Star Protocols. 2024; 5:103233.

Mitelpunkt, A; Stodola, MA; Vargus-Adams, J; Kurowski, BG; Greve, K; Bhatnagar, S; Aronow, B; Zahner, J; Bailes, AF. A big data approach to evaluate receipt of optimal care in childhood cerebral palsy. Disability and Rehabilitation. 2024; 46:723-730.

Monangi, NK; Xu, H; Fan, YM; Khanam, R; Khan, W; Deb, S; Pervin, J; Price, JT; Kaur, L; Villar, J; Stringer, JS A; Ashorn, P; Zhang, G; Muglia, LJ. Association of maternal prenatal copper concentration with gestational duration and preterm birth: a multicountry meta-analysis. American Journal of Clinical Nutrition. 2024; 119:221-231.

Nakagaki, R; Debsarkar, SS; Kawanaka, H; Aronow, BJ; Prasath, VB S. Deep learning-based IDH1 gene mutation prediction using histopathological imaging and clinical data. Computers in Biology and Medicine. 2024; 179:108902.

Ochayon, DE; DeVore, SB; Chang, WC; Krishnamurthy, D; Seelamneni, H; Grashel, B; Spagna, D; Andorf, S; Martin, LJ; Biagini, JM; Waggoner, SN; Khurana Hershey, GK. Progressive accumulation of hyperinflammatory NKG2Dlow NK cells in early childhood severe atopic dermatitis. Science Immunology. 2024; 9:eadd3085.

Oelschläger, L; Nicolet, D; Mrózek, K; Schnell, D; Alotaibi, N; Walker, CJ; Mims, A; Blachly, JS; Powell, BL; Kolitz, JE; Salomonis, N; Grimes, HL; Fornerod, M; Eisfeld, A. Transcriptomically Defined Acute Myeloid Leukemia, Myelodysplasia-Related (AML-MR) Phenotype Governs Mutation-Based Disease Group Assignment. Blood. 2024; 144:641.

Ozga, M; Nicolet, D; Mrózek, K; Yilmaz, AS; Kohlschmidt, J; Larkin, KT; Blachly, JS; Oakes, CC; Buss, J; Walker, CJ; Salomonis, N; Herold, T; Mims, AS; Eisfeld, AK. Sex-associated differences in frequencies and prognostic impact of recurrent genetic alterations in adult acute myeloid leukemia (Alliance, AMLCG). Leukemia. 2024; 38:45-57.

Paneru, BD; Chini, J; McCright, SJ; DeMarco, N; Miller, J; Joannas, LD; Henao-Mejia, J; Titchenell, PM; Merrick, DM; Lim, HW; Lazar, MA; Hill, DA. Myeloid-derived miR-6236 potentiates adipocyte insulin signaling and prevents hyperglycemia during obesity. Nature Communications. 2024; 15:5394.

Poweleit, EA; Vaughn, SE; Desta, Z; Dexheimer, JW; Strawn, JR; Ramsey, LB. Machine Learning-Based Prediction of Escitalopram and Sertraline Side Effects With Pharmacokinetic Data in Children and Adolescents. Clinical Pharmacology and Therapeutics. 2024; 115:860-870.

Rajdeo, P; Aronow, B; Surya Prasath, VB. Deep learning-based multimodal spatial transcriptomics analysis for cancer. Cutting Edge Artificial Intelligence, Spatial Transcriptomics and Proteomics Approaches to Analyze Cancer. : Elsevier; Elsevier; 2024.

Razzaghi, H; Davies, AG; Boss, S; Timothy Bunnell, H; Chen, Y; Chrischilles, EA; Dickinson, K; Hanauer, D; Huang, Y; Sandra Ilunga, KT; Walters, K; Denburg, MR; Forrest, CB; Charles Bailey, L. Systematic data quality assessment of electronic health record data to evaluate study-specific fitness: Report from the PRESERVE research study. Editor, Armengol de la Hoz MÁ. PLOS Digital Health. 2024; 3:e0000527.

Rogerson, C; AbuSultaneh, S; Sanchez-Pinto, LN; Gaston, B; Wiehe, S; Schleyer, T; Tu, W; Mendonca, E. A matched analysis of the use of high flow nasal cannula for pediatric severe acute asthma. Pediatric Pulmonology. 2024; 59:3457-3466.

Rogerson, C; Nelson Sanchez-Pinto, L; Gaston, B; Wiehe, S; Schleyer, T; Tu, W; Mendonca, E. Identification of severe acute pediatric asthma phenotypes using unsupervised machine learning. Pediatric Pulmonology. 2024; 59:3313-3321.

Rogerson, C; Owora, A; Tu, W; Mendonca, E. The influence of social and environmental determinants of health on hospitalizations for pediatric asthma. Journal of Asthma (Informa). 2024; 61:453-462.

Ryan, PH; Zanobetti, A; Coull, BA; Andrews, H; Bacharier, LB; Bailey, D; Beamer, PI; Blossom, J; Brokamp, C; Datta, S; Wright, AL; Zoratti, EM; Gern, JE; Gold, DR. The Legacy of Redlining: Increasing Childhood Asthma Disparities through Neighborhood Poverty. American Journal of Respiratory and Critical Care Medicine. 2024; 210:1201-1209.

Samer, EK; Morris, SA; Hutter, CM; Gilchrist, DA; Calluori, S; Bly, Z; Osorio, D; Zhang, L; He, W; Fu, R; Borsari, B; Assis, PR; Andreeva, K; Gerstein, MB. Deciphering the impact of genomic variation on function. Nature. 2024; 633:47-57.

Sara, SA; Schwarz, A; Knopp, MI; Warm, EJ. Twelve tips for creating a longitudinal quality improvement and safety education for early health professions students. Medical Teacher (Informa). 2024; 46:330-336.

Sarfraz, I; Wang, Y; Shastry, A; Teh, WK; Sokolov, A; Herb, BR; Creasy, HH; Virshup, I; Dries, R; Degatano, K; Hilton, J; Gehlenborg, N; Tickle, T; Campbell, JD. MAMS: matrix and analysis metadata standards to facilitate harmonization and reproducibility of single-cell data. Genome Biology: biology for the post-genomic era. 2024; 25:205.

Solomon, M; Song, B; Govindarajah, V; Good, S; Arasu, A; Hinton, EB; Thakkar, K; Bartram, J; Filippi, MD; Cancelas, JA; Salomonis, N; Grimes, HL; Reynaud, D. Slow cycling and durable Flt3+ progenitors contribute to hematopoiesis under native conditions. The Journal of Experimental Medicine. 2024; 221:e20231035.

Sorter, M; Stark, LJ; Glauser, T; McClure, J; Pestian, J; Junger, K; Cheng, TL. Addressing the Pediatric Mental Health Crisis: Moving from a Reactive to a Proactive System of Care. The Journal of Pediatrics. 2024; 265:113479.

Stiff, A; Fornerod, M; Kain, BN; Nicolet, D; Kelly, BJ; Miller, KE; Mrózek, K; Boateng, I; Bollas, A; Garfinkle, EA R; Salomonis, N; Grimes, HL; Mardis, ER; Eisfeld, AK. Multiomic profiling identifies predictors of survival in African American patients with acute myeloid leukemia. Nature Genetics. 2024; 56:2434-2446.

Sullivan, KA; Lane, M; Cashman, M; Miller, JI; Pavicic, M; Walker, AM; Cliff, A; Romero, J; Qin, X; Mullins, N; Oslin, DW; Kimbrel, NA; Jacobson, DA; Kainer, D. Analyses of GWAS signal using GRIN identify additional genes contributing to suicidal behavior. Communications Biology. 2024; 7:1360.

SUMI, G; KITAJIMA, T; KAWANAKA, H; IYER, B; SURYA PRASATH, VB; ARONOW, BJ. 教師なし深層学習モデルを用いた脳性麻痺患者のための歩行機能評価手法の提案と基礎的検討. Journal of Japan Society for Fuzzy Theory and Intelligent Informatics. 2024; 36:527-531.

Temple, H; Donnelly, B; Mohanty, SK; Mowery, S; Poling, HM; Pasula, R; Hartman, S; Singh, A; Mourya, R; Bondoc, A; Oyama, K; McNeal, M; Spearman, P; Tiao, G. Specific binding sites on Rhesus rotavirus capsid protein dictate the method of endocytosis inducing the murine model of biliary atresia. American Journal of Physiology: Gastrointestinal and Liver Physiology. 2024; 327:G267-G283.

Thorman, AW; Reigle, J; Chutipongtanate, S; Yang, J; Shamsaei, B; Pilarczyk, M; Fazel-Najafabadi, M; Adamczak, R; Kouril, M; Bhatnagar, S; Hildeman, DA; Medvedovic, M; Herr, AB; Meller, J. Accelerating drug discovery and repurposing by combining transcriptional signature connectivity with docking. Science Advances. 2024; 10:eadj3010.

Tsuda, S; Shichino, S; Tilburgs, T; Shima, T; Morita, K; Yamaki-Ushijima, A; Roskin, K; Tomura, M; Sameshima, A; Saito, S; Nakashima, A. CD4+ T cell heterogeneity in gestational age and preeclampsia using single-cell RNA sequencing. Frontiers in Immunology. 2024; 15:1401738.

Tursi, AR; Lindeman, B; Kristoffersen, AB; Hjertholm, H; Bronder, E; Andreassen, M; Husøy, T; Dirven, H; Andorf, S; Nygaard, UC. Immune cell profiles associated with human exposure to perfluorinated compounds (PFAS) suggest changes in natural killer, T helper, and T cytotoxic cell subpopulations. Environmental Research. 2024; 256:119221.

Underwood, B; Mills, C; Devonshire, AL; Andorf, S; Assa'ad, AH; Ramsey, R; Schwartz, JT. OIT-BRAVE questionnaire: Development and clinical implementation of a screening instrument for patient-reported difficulties during oral immunotherapy. The Journal of Allergy and Clinical Immunology: in Practice. 2024; 12:2524-2526.e1.

Wang, X; Du, W; Li, Y; Yang, HH; Zhang, Y; Akbar, R; Morgan, H; Peng, T; Chen, J; Sadayappan, S; Hu, YC; Fan, Y; Huang, W; Fan, GC. Macrophage-enriched Sectm1a promotes efficient efferocytosis to attenuate ischemia/reperfusion-induced cardiac injury. JCI insight. 2024; 9:e173832.

Wang, Z; Zhou, G; Palipana, A; Gecili, E; Dexheimer, JW; Siracusa, C; Szczesniak, R. Secular and modulator-specific drifts in the predictive performance of a rapid lung function decline algorithm: a cystic fibrosis patient registry study. 2024; 2:10.

Warm, EJ; Kinnear, B; Knopp, MI; Powers-Fletcher, M; Segev, M; Willauer, A; Schauer, D. Ambulatory Long Block: A Model of Precision Education and Assessment for Internal Medicine Residents. Academic Medicine. 2024; 99:S57-S63.

Wiley, K; Blackburn, J; Mendonca, E; Menachemi, N; De Groot, M; Vest, JR. Associations between patient portal use and electronic health record (EHR) data timeliness in type 2 diabetes mellitus care. Journal of Diabetes and Metabolic Disorders. 2024; 23:2073-2080.

Wissel, BD; Greiner, HM; Glauser, TA; Pestian, JP; Ficker, DM; Cavitt, JL; Estofan, L; Holland-Bouley, KD; Mangano, FT; Szczesniak, RD; Dexheimer, JW. Early Identification of Candidates for Epilepsy Surgery: A Multicenter, Machine Learning, Prospective Validation Study. Neurology. 2024; 102:e208048.

Xia, S; Li, YF; Raschi, E; Zhang, BK; Noguchi, Y; Sarangdhar, M; Yan, M; Ma, JA. Disproportional signal of pericarditis with biological diseasemodifying antirheumatic drugs (bDMARDs) in patients with ankylosing spondylitis: a disproportionality analysis in the FAERS database. Frontiers in Pharmacology. 2024; 15:1275814.

Xia, S; Xu, JW; Yan, KX; Noguchi, Y; Sarangdhar, M; Yan, M. Tumor lysis syndrome signal with the combination of encorafenib and binimetinib for malignant melanoma: a pharmacovigilance study using data from the FAERS database. Frontiers in Pharmacology. 2024; 15:1413154.

Xu, H; Zhang, G; Chen, J. A novel method for cell deconvolution using DNA methylation in PCA space. BMC Genomics. 2024; 25:798.

Yates, AM; Aygun, B; Nuss, R; Rogers, ZR; Wetmore, C; Dickens, D; Majumdar, S; Rogers, ZR; Stoffman, J; Warwick, A; Jeng, M; Velez, M; Wechsler, D; Hooker, R. Health Supervision for Children and Adolescents With Sickle Cell Disease: Clinical Report. Pediatrics. 2024; 154:e2024066842.

Yombo, DJ K; Ghandikota, S; Vemulapalli, CP; Singh, P; Jegga, AG; Hardie, WD; Madala, SK. SEMA3B inhibits TGFβ-induced extracellular matrix protein production and its reduced levels are associated with a decline in lung function in IPF. American Journal of Physiology: Cell Physiology. 2024; 326:C1659-C1668.

Yuan, W; Stevenson, CB; Moretti, P; Mangano, FT; Pavanello, M; Cama, A; Tortora, D; Tacchino, C; Bailes, AF; Greve, KR; Harpster, K; Kurowski, BG; Mitelpunkt, A; Aronow, B. White matter characteristics in children with cerebral palsy prior to selective dorsal rhizotomy: a multicenter diffusion tensor imaging study. Journal of Neurosurgery: Pediatrics. 2024; 34:268-277.

Zanobetti, A; Ryan, PH; Coull, BA; Luttmann-Gibson, H; Datta, S; Blossom, J; Brokamp, C; Lothrop, N; Miller, RL; Beamer, PI; Ramratnam, SK; Calatroni, A; Gern, JE; Gold, DR. Early-Life Exposure to Air Pollution and Childhood Asthma Cumulative Incidence in the ECHO CREW Consortium. JAMA network open. 2024; 7:e240535.

Zhang, X; Song, B; Carlino, MJ; Li, G; Ferchen, K; Chen, M; Thompson, EN; Kain, BN; Schnell, D; Thakkar, K; Singh, H; Krause, DS; Salomonis, N; Grimes, HL. An immunophenotype-coupled transcriptomic atlas of human hematopoietic progenitors. Nature Immunology. 2024; 25:703-715.

Zhang, Y; Wang, X; Zhu, R; Sakabe, M; Chowdhury, D; Li, Z; Chen, J; Huang, W; Xin, M; Fan, G. Abstract 4118360: Lipocalin10 is Critical for Macrophage Efferocytosis to Repair Myocardial Ischemia/Reperfusion Injury. Circulation. 2024; 150:a4118360.

Zhu, R; Zhang, Y; Wang, X; Liu, BD; Chowdhury, D; Li, Z; Pan, M; Peng, T; Chen, J; Huang, W; Zhan, L; Fan, GC. Probiotic bacteria-released extracellular vesicles enhance macrophage phagocytosis in polymicrobial sepsis by activating the FPR1/2 pathway. Molecular medicine (Cambridge, Mass.). 2024; 30:216.

銀河, 鷲; 普晴, 川; 巧海, 北; Prasath, VB S; Aronow, BJ. Auto-Encoderを用いた脳性麻痺患者のための歩行機能評価手法に関する一検討. 2024; 345-348.