Experimental Hematology and Cancer Biology
Lu Lab

Lu Research Lab

Glia cells, myelination, tumorigenesis and cancer neuroscience

Recent studies indicate a convergence between neural developmental processes, neurological disorders and brain tumorigenesis whereby insight into one yields insight into the others. We are interested in understanding how distinct glial cell types (e.g., myelinating oligodendrocytes) and their stem / progenitor cells contribute to neurological diseases and how dysregulated developmental programs play a role in tumorigenesis both in the central (CNS) and peripheral (PNS) nervous systems.

A major focus of our lab is to elucidate the transcriptional, posttranscriptional, epigenetic, and signaling networks that govern development, remyelination, and tumor formation in the CNS and PNS. We have established a series of in vitro and in vivo animal models to understand the mechanisms underlying myelinogenesis and neurodegenerative diseases such as multiple sclerosis and autism spectrum disorder, as well as brain tumorigenesis by using endogenous and patient-derived brain or neural tumor models that recapitulate histological and molecular features of human tumors.

We use cutting-edge molecular and cellular approaches (e.g., single-cell multi-omics, functional genomics, and spatial transcriptomics) to dissect how the genetic, epigenetic, and microenvironment controls brain or neural cancer development, recurrence, and metastasis. Our cross-species genomic analyses of human tumors and developing brain tissue at the single cell resolution coupled with genetic mouse modeling have identified a set of glial progenitor-like cells (e.g., Olig2+ pri-OPCs) and “stem-like’ cells (e.g., transitional cerebellar progenitors) as key in the formation of malignant gliomas and medulloblastoma, respectively, pointing to specific cell lineages as the origin of distinct brain tumors, and potential lineage-specific vulnerabilities for targeting distinct subtypes of brain tumors. We are also investigating the tumor microenvironment control of cancer stem cell fitness, tumor recurrence and metastasis by using lineage-traceable model systems for developing effective immunotherapy.

Current projects in Lu Lab aim to: 

  1. Leverage cutting-edge genomic and multi-omics approaches to dissect the brain tumor cells of origin and underlying molecular and signaling pathways that are hijacked and altered during the evolution of brain cancers including glioblastoma, medulloblastoma, ependymoma, and diffuse midline gliomas (DMG / DIPG) (Luo et al., Nature, 2022; Hu et al., Nature Cell Biology, 2023; Weng et al., Cell Stem Cell, 2019; Zhang et al., Cancer Cell, 2019; Lu et al., Cancer Cell, 2016, He et al., Nature medicine, 2014).
  2. Define transcriptional, signaling, and epigenetic control of myelination and functional nerve regeneration by using in vitro primary neural cell culture, genetically-engineered mice, and pharmacogenomic approaches (Yu et al., Cell, 2013; Wang, et al., Science Advances, 2020; He et al., Nature medicine, 2018; Zhao et al., Dev Cell 2018; He et al., Neuron, 2017; Wang et al., Dev Cell 2017; He et al., Nature Neuroscience, 2016).
  3. Dissect molecular and signaling mechanisms that control Schwann cell myelination in the PNS and the malignant transformation of peripheral nerve sheath tumors (MPNST) by defining the tumor stem-like subpopulation, tumor cell–state evolution and heterogeneity and their regulatory circuitries during NF-to-MPNST transformation (Wu, et al., Science Advances, 2022; Wu et al., Cancer Cell, 2018; Deng et al., Nature communications, 2017; Wu et al., Nature Neuroscience, 2016).

Our research goals comprise dissecting the etiological mechanisms of these neurological diseases and cancers to develop effective therapies respectively through promoting myelin repair and functional nerve regeneration or blocking brain tumorigenesis and recurrence.

Publications

Luo, Z; Xin, D; Liao, Y; Berry, K; Ogurek, S; Zhang, F; Zhang, L; Zhao, C; Rao, R; Dong, X; et al. Loss of phosphatase CTDNEP1 potentiates aggressive medulloblastoma by triggering MYC amplification and genomic instability. Nature Communications. 2023; 14:762.

Hu, X; Wu, X; Berry, K; Zhao, C; Xin, D; Ogurek, S; Liu, X; Zhang, L; Luo, Z; Sakabe, M; et al. Nuclear condensates of YAP fusion proteins alter transcription to drive ependymoma tumourigenesis. Nature Cell Biology. 2023; 25:323-336.

Luo, Z; Xia, M; Shi, W; Zhao, C; Wang, J; Xin, D; Dong, X; Xiong, Y; Zhang, F; Berry, K; et al. Human fetal cerebellar cell atlas informs medulloblastoma origin and oncogenesis. Nature. 2022; 612:787-794.

Wang, J; Yang, L; Dong, C; Wang, J; Xu, L; Qiu, Y; Weng, Q; Zhao, C; Xin, M; Lu, QR. EED-mediated histone methylation is critical for CNS myelination and remyelination by inhibiting WNT, BMP, and senescence pathways. Science Advances. 2020; 6:eaaz6477.

Zhang, L; He, X; Liu, X; Zhang, F; Huang, LF; Potter, AS; Xu, L; Zhou, W; Zheng, T; Luo, Z; et al. Single-Cell Transcriptomics in Medulloblastoma Reveals Tumor-Initiating Progenitors and Oncogenic Cascades during Tumorigenesis and Relapse. Cancer Cell. 2019; 36:302-318.e7.

Weng, Q; Wang, J; Wang, J; He, D; Cheng, Z; Zhang, F; Verma, R; Xu, L; Dong, X; Liao, Y; et al. Single-Cell Transcriptomics Uncovers Glial Progenitor Diversity and Cell Fate Determinants during Development and Gliomagenesis. Cell Stem Cell. 2019; 24:707-723.e8.

He, X; Zhang, L; Queme, LF; Liu, X; Lu, A; Waclaw, RR; Dong, X; Zhou, W; Kidd, G; Yoon, S; et al. A histone deacetylase 3-dependent pathway delimits peripheral myelin growth and functional regeneration. Nature Medicine. 2018; 24:338-351.

Lu, F; Chen, Y; Zhao, C; Wang, H; He, D; Xu, L; Wang, J; He, X; Deng, Y; Lu, EE; et al. Olig2-Dependent Reciprocal Shift in PDGF and EGF Receptor Signaling Regulates Tumor Phenotype and Mitotic Growth in Malignant Glioma. Cancer Cell. 2016; 29:669-683.

He, X; Zhang, L; Chen, Y; Remke, M; Shih, D; Lu, F; Wang, H; Deng, Y; Yu, Y; Xia, Y; et al. The G protein α subunit Gαs is a tumor suppressor in Sonic hedgehog-driven medulloblastoma. Nature Medicine. 2014; 20:1035-1042.

Yu, Y; Chen, Y; Kim, B; Wang, H; Zhao, C; He, X; Liu, L; Liu, W; Wu, LM N; Mao, M; et al. Olig2 targets chromatin remodelers to enhancers to initiate oligodendrocyte differentiation. Cell. 2013; 152:248-261.

Sun, H; Yan, R; Hua, L; Xia, Y; Chen, Z; Huang, Y; Wang, X; Xia, Q; Yao, Z; Lu, Q. Abnormal stability of spontaneous neuronal activity as a predictor of diagnosis conversion from major depressive disorder to bipolar disorder. Journal of Psychiatric Research. 2024; 171:60-68.

Koschmann, C; Al-Holou, WN; Alonso, MM; Anastas, J; Bandopadhayay, P; Barron, T; Becher, O; Cartaxo, R; Castro, MG; Chung, C; et al. A road map for the treatment of pediatric diffuse midline glioma. Cancer Cell. 2024; 42:1-5.

Garrett, MC; Albano, R; Carnwath, T; Elahi, L; Behrmann, CA; Pemberton, M; Woo, D; O’Brien, E; VanCauwenbergh, B; Perentesis, J; et al. HDAC1 and HDAC6 are essential for driving growth in IDH1 mutant glioma. Scientific Reports. 2023; 13:12433.

Luo, Z; Xin, D; Liao, Y; Berry, K; Ogurek, S; Zhang, F; Zhang, L; Zhao, C; Rao, R; Dong, X; et al. Loss of phosphatase CTDNEP1 potentiates aggressive medulloblastoma by triggering MYC amplification and genomic instability. Nature Communications. 2023; 14:762.

Wang, F; Wang, W; Gu, S; Qi, D; Smith, NA; Peng, W; Dong, W; Yuan, J; Zhao, B; Mao, Y; et al. Distinct astrocytic modulatory roles in sensory transmission during sleep, wakefulness, and arousal states in freely moving mice. Nature Communications. 2023; 14:2186.

Talley, MJ; Nardini, D; Ehrman, LA; Lu, QR; Waclaw, RR. Distinct requirements for Tcf3 and Tcf12 during oligodendrocyte development in the mouse telencephalon. Neural Development. 2023; 18:5.

Fan, C; Wunderlich, M; Cai, X; Yan, Z; Zhang, F; Davis, AK; Xu, L; Guo, F; Lu, QR; Azam, M; et al. Kinase-independent role of mTOR and on-/off-target effects of an mTOR kinase inhibitor. Leukemia. 2023; 37:2073-2081.

Luo, Z; Lu, R. MDB-05. HUMAN FETAL CEREBELLAR CELL ATLAS INFORMS MEDULLOBLASTOMA ORIGIN AND ONCOGENESIS. Neuro-Oncology. 2023; 25:i62.

Lu, R; Luo, Z. MDB-02. NUCLEAR ENVELOPE PHOSPHATASE CTDNEP1 MUTATIONS POTENTIATE AGGRESSIVE MEDULLOBLASTOMA BY TRIGGERING MYC ACTIVATION AND GENOMIC INSTABILITY. Neuro-Oncology. 2023; 25:i61-i62.

Thompson, M; Sakabe, M; Verba, M; Hao, J; Meadows, SM; Lu, QR; Xin, M. PRDM16 regulates arterial development and vascular integrity. Frontiers in Physiology. 2023; 14:1165379.

Zhang, J; Guan, M; Zhou, X; Berry, K; He, X; Lu, QR. Long Noncoding RNAs in CNS Myelination and Disease. The Neuroscientist: reviews at the interface of basic and clinical neurosciences. 2023; 29:287-301.

Verma, R; Chen, X; Xin, D; Luo, Z; Ogurek, S; Xin, M; Rao, R; Berry, K; Lu, QR. Olig1/2-Expressing Intermediate Lineage Progenitors Are Predisposed to PTEN/p53-Loss-Induced Gliomagenesis and Harbor Specific Therapeutic Vulnerabilities. Cancer Research. 2023; 83:890-905.

Hu, X; Wu, X; Berry, K; Zhao, C; Xin, D; Ogurek, S; Liu, X; Zhang, L; Luo, Z; Sakabe, M; et al. Nuclear condensates of YAP fusion proteins alter transcription to drive ependymoma tumourigenesis. Nature Cell Biology. 2023; 25:323-336.

Luo, Z; Xia, M; Shi, W; Zhao, C; Wang, J; Xin, D; Dong, X; Xiong, Y; Zhang, F; Berry, K; et al. Human fetal cerebellar cell atlas informs medulloblastoma origin and oncogenesis. Nature. 2022; 612:787-794.

Sakabe, M; Thompson, M; Chen, N; Verba, M; Hassan, A; Lu, R; Xin, M. Inhibition of β1-AR/Gαs signaling promotes cardiomyocyte proliferation in juvenile mice through activation of RhoA-YAP axis. eLife. 2022; 11:e74576.

Garrett, MC; Albano, R; Carnwath, T; Shah, S; Woo, D; Lamba, M; Plas, DR; Paranjpe, A; Roskin, K; Zhao, C; et al. Chromatin structure predicts survival in glioma patients. Scientific Reports. 2022; 12:8221.

Kalim, KW; Yang, JQ; Wunderlich, M; Modur, V; Nguyen, P; Li, Y; Wen, T; Davis, AK; Verma, R; Lu, QR; et al. Targeting of Cdc42 GTPase in regulatory T cells unleashes antitumor T-cell immunity. Journal for ImmunoTherapy of Cancer. 2022; 10:e004806.

Intisar, A; Shin, HY; Kim, WH; Kang, HG; Kim, MY; Kim, YS; Cho, Y; Mo, YJ; Lim, H; Lee, S; et al. Implantable Electroceutical Approach Improves Myelination by Restoring Membrane Integrity in a Mouse Model of Peripheral Demyelinating Neuropathy. Advanced Science. 2022; 9:e2201358.

Berry, K; Ogurek, S; Rao, R; Lu, R. TMIC-47. SINGLE-CELL TRANSCRIPTOMICS REVEALS ANTITUMOR IMMUNE RESPONSES OF PROTON TREATMENT IN GLIOBLASTOMA. Neuro-Oncology. 2022; 24:vii281-vii282.

Luo, Z; Lu, R. STEM-24. SINGLE-CELL ATLAS OF HUMAN FETAL CEREBELLUM DECODING MEDULLOBLASTOMA ORIGIN AND ONCOGENESIS. Neuro-Oncology. 2022; 24:vii36.

Wang, J; Yang, L; Jiang, M; Zhao, C; Liu, X; Berry, K; Waisman, A; Langseth, AJ; Novitch, BG; Bergles, DE; et al. Olig2 Ablation in Immature Oligodendrocytes Does Not Enhance CNS Myelination and Remyelination. The Journal of neuroscience : the official journal of the Society for Neuroscience. 2022; 42:8542-8555.

Liao, Y; Luo, Z; Lin, Y; Chen, H; Chen, T; Xu, L; Orgurek, S; Berry, K; Dzieciatkowska, M; Reisz, JA; et al. PRMT3 drives glioblastoma progression by enhancing HIF1A and glycolytic metabolism. Cell Death and Disease. 2022; 13:943.

Wu, LM N; Zhang, F; Rao, R; Adam, M; Pollard, K; Szabo, S; Liu, X; Belcher, KA; Luo, Z; Ogurek, S; et al. Single-cell multiomics identifies clinically relevant mesenchymal stem-like cells and key regulators for MPNST malignancy. Science Advances. 2022; 8:eabo5442.

Dong, C; Zhao, C; Chen, X; Berry, K; Wang, J; Zhang, F; Liao, Y; Han, R; Ogurek, S; Xu, L; et al. Conserved and Distinct Functions of the Autism-Related Chromatin Remodeler CHD8 in Embryonic and Adult Forebrain Neurogenesis. The Journal of neuroscience : the official journal of the Society for Neuroscience. 2022; 42:8373-8392.

Yi, J; Kim, BW; Shi, X; Zhan, X; Lu, QR; Xuan, Z; Wu, J. PRC2 Heterogeneity Drives Tumor Growth in Medulloblastoma. Cancer Research. 2022; 82:2874-2886.

Tu, Z; Fan, C; Davis, AK; Hu, M; Wang, C; Dandamudi, A; Seu, KG; Kalfa, TA; Lu, QR; Zheng, Y. Autism-associated chromatin remodeler CHD8 regulates erythroblast cytokinesis and fine-tunes the balance of Rho GTPase signaling. Cell Reports. 2022; 40:111072.

Rao, R; Han, R; Ogurek, S; Xue, C; Wu, LM; Zhang, L; Zhang, L; Hu, J; Phoenix, TN; Waggoner, SN; et al. Glioblastoma genetic drivers dictate the function of tumor-associated macrophages/microglia and responses to CSF1R inhibition. Neuro-Oncology. 2022; 24:584-597.

Del Águila, Á; Adam, M; Ullom, K; Shaw, N; Qin, S; Ehrman, J; Nardini, D; Salomone, J; Gebelein, B; Lu, QR; et al. Olig2 defines a subset of neural stem cells that produce specific olfactory bulb interneuron subtypes in the subventricular zone of adult mice. Development (Cambridge). 2022; 149:dev200028.

Zhang, M; Wang, J; Zhang, K; Lu, G; Liu, Y; Ren, K; Wang, W; Xin, D; Xu, L; Mao, H; et al. Ten-eleven translocation 1 mediated-DNA hydroxymethylation is required for myelination and remyelination in the mouse brain. Nature Communications. 2021; 12:5091.

Wargent, ET; Ahmad, SJ S; Lu, QR; Kostenis, E; Arch, JR S; Stocker, CJ. Leanness and Low Plasma Leptin in GPR17 Knockout Mice Are Dependent on Strain and Associated With Increased Energy Intake That Is Not Suppressed by Exogenous Leptin. Frontiers in Endocrinology. 2021; 12:698115.

Guo, D; Wang, Y; Cheng, Y; Liao, S; Hu, J; Du, F; Xu, G; Liu, Y; Cai, KQ; Cheung, M; et al. Tumor cells generate astrocyte-like cells that contribute to SHH-driven medulloblastoma relapse. The Journal of Experimental Medicine. 2021; 218:e20202350.

Geraldo, LH; Xu, Y; Jacob, L; Pibouin-Fragner, L; Rao, R; Maissa, N; Verreault, M; Lemaire, N; Knosp, C; Lesaffre, C; et al. SLIT2/ROBO signaling in tumor-associated microglia and macrophages drives glioblastoma immunosuppression and vascular dysmorphia. The Journal of Clinical Investigation. 2021; 131:141083.

Tu, Z; Wang, C; Davis, AK; Hu, M; Zhao, C; Xin, M; Lu, QR; Zheng, Y. The chromatin remodeler CHD8 governs hematopoietic stem/progenitor survival by regulating ATM-mediated P53 protein stability. Blood. 2021; 138:221-233.

Tu, Z; Wang, C; Davis, AK; Hu, M; Zhao, C; Xin, M; Lu, QR; Zheng, Y. Chromatin remodeler CHD8 governs hematopoietic stem/progenitor survival by regulating ATM-mediated P53 protein stability. Blood. 2021; 138:221-233.

Liao, Y; Luo, Z; Deng, Y; Zhang, F; Rao, R; Wang, J; Xu, L; Kumar, SS; Sengupta, S; Dewire-Schottmiller, M; et al. OLIG2 maintenance is not essential for diffuse intrinsic pontine glioma cell line growth but regulates tumor phenotypes. Neuro-Oncology. 2021; 23:1183-1196.

Luo, Z; Dong, X; Yu, J; Xia, Y; Berry, KP; Rao, R; Xu, L; Xue, P; Chen, T; Lin, Y; et al. Genomic and Transcriptomic Analyses Reveals ZNF124 as a Critical Regulator in Highly Aggressive Medulloblastomas. Frontiers in Cell and Developmental Biology. 2021; 9:634056.

Fan, C; Zhao, C; Zhang, F; Kesarwani, M; Tu, Z; Cai, X; Davis, AK; Xu, L; Hochstetler, CL; Chen, X; et al. Adaptive responses to mTOR gene targeting in hematopoietic stem cells reveal a proliferative mechanism evasive to mTOR inhibition. Proceedings of the National Academy of Sciences of USA. 2021; 118:e2020102118.

Wang, J; He, X; Meng, H; Li, Y; Dmitriev, P; Tian, F; Page, JC; Lu, QR; He, Z. Robust Myelination of Regenerated Axons Induced by Combined Manipulations of GPR17 and Microglia. Neuron. 2020; 108:876-886.e4.

Wang, J; Wang, J; Yang, L; Zhao, C; Wu, LN; Xu, L; Zhang, F; Weng, Q; Wegner, M; Lu, QR. CTCF-mediated chromatin looping in EGR2 regulation and SUZ12 recruitment critical for peripheral myelination and repair. Nature Communications. 2020; 11:4133.

Ueno, M; Nakamura, Y; Nakagawa, H; Niehaus, JK; Maezawa, M; Gu, Z; Kumanogoh, A; Takebayashi, H; Lu, QR; Takada, M; et al. Olig2-Induced Semaphorin Expression Drives Corticospinal Axon Retraction After Spinal Cord Injury. Cerebral Cortex. 2020; 30:5702-5716.

Althoff, MJ; Nayak, RC; Hegde, S; Wellendorf, AM; Bohan, B; Filippi, MD; Xin, M; Richard Lu, Q; Geiger, H; Zheng, Y; et al. Yap1-Scribble polarization is required for hematopoietic stem cell division and fate. Blood. 2020; 136:1824-1836.

Wang, J; Lu, QR. Convergent epigenetic regulation of glial plasticity in myelin repair and brain tumorigenesis: A focus on histone modifying enzymes. Neurobiology of Disease. 2020; 144:105040.

Wang, J; Yang, L; Dong, C; Wang, J; Xu, L; Qiu, Y; Weng, Q; Zhao, C; Xin, M; Lu, QR. EED-mediated histone methylation is critical for CNS myelination and remyelination by inhibiting WNT, BMP, and senescence pathways. Science Advances. 2020; 6:eaaz6477.

Chen, Y; Shi, J; Liu, H; Wang, Q; Chen, X; Tang, H; Yan, R; Yao, Z; Lu, Q. Plasma microRNA Array Analysis Identifies Overexpressed miR-19b-3p as a Biomarker of Bipolar Depression Distinguishing From Unipolar Depression. Frontiers in Psychiatry. 2020; 11:757.

Parras, C; Marie, C; Zhao, C; Lu, QR. Chromatin remodelers in oligodendroglia. Glia. 2020; 68:1604-1618.

Berry, K; Wang, J; Richard Lu, Q. Epigenetic regulation of oligodendrocyte myelination in developmental disorders and neurodegenerative diseases. F1000Research. 2020; 9:F1000 Faculty Rev-105.

Berry, KP; Lu, QR. Chromatin modification and epigenetic control in functional nerve regeneration. Seminars in Cell and Developmental Biology. 2020; 97:74-83.

Weng, Q; Zhao, M; Zheng, J; Yang, L; Xu, Z; Zhang, Z; Wang, J; Wang, J; Yang, B; Lu, QR; et al. STAT3 dictates β-cell apoptosis by modulating PTEN in streptozocin-induced hyperglycemia. Cell Death and Differentiation. 2020; 27:130-145.

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