Pestian Lab

Journal Club Presentations

2016

Date	Paper Topic	Presenter	Link to Article	Presentation
1/22/2016		Kevin Cohen
3/4/2016	Pestian Lab structure discussion
3/11/2016	Audio testing for SAM app
4/1/2016		Benjamin Glass
4/8/2016		Hedayat Abrishami
4/15/2016	Internship candidate presentation
4/25/2016		Benjamin Glass
4/29/2016	Post-doc presentation
5/6/2016	Post-doc presentation
5/20/2016	Vendor presentation
5/27/2016	Post-doc presentation	Carlos Salas

2015

Date	Paper Topic	Presenter	Link to Article	Presentation
1/9/2015	Translating Without In-Domain Corpus: Machine Translation Post-Editing with Online Learning Techniques	Todd Lingren	Read the article.	View the presentation.
2/6/2015	Dyadic Behavior Analysis in Depression Severity Assessment Interviews	Rachel McCourt	Read the article.	View the presentation.
2/27/2015	Does One Size Really Fit All? Evaluating Classifiers in Bag-of-Visual-Words Classification	Benjamin Glass	Read the article.	View the presentation.
3/6/2015	Using Administrative/EMR Data to Understand Health Risk Behaviors Among Teens in Foster Care	Sarah Beal
3/27/2015	An Ontology-Based Automatic Semantic Annotation Approach for Patent Document Retrieval in Product Innovation Design	Ni Yizhao	Read the article.	View the presentation.
4/3/2015	Towards Cross Language Morphologic Negation Identification in Electronic Health Records	Judith Dexheimer	Read the article.	View the presentation.
4/17/2015	NO Presentation
5/8/2015	NO Presentation
9/24/2015	Automated Systems for the De-identification of Longitudinal Clinical Narratives: Overview of 2014 i2b2/UTHealth Shared Task Track 1	Todd Lingren	Read the article.	View the presentation.
10/2/2015	Automatic Detection of Protected Health Information From Clinic Narratives/ Combining Knowledge and Data-Driven Methods for De-identification of Clinical Narratives	Yizhao Ni	Read the article. Read the article.	View the presentation.
10/16/2015	Paul Thompson, Guest Speaker
10/30/2015	PhD Class Discussion
11/6/2015	STM Manuscript Review
12/11/2015	Dr. Guergana Savova, Guest Speaker

2014

Date	Paper Topic	Presenter	Link to Article	Presentation
2/28/2014	Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications	Todd Lingren	Read the article.
3/7/2014	Study of Transportability of an Existing Smoking Status Detection Module across Institutions	Brian Connolly	Read the article.	View the presentation
3/14/2014	An overview of MetaMap: historical perspective and recent advances	Pawel Matykiewicz	Read the article.	View the presentation.
4/4/2014	An Analysis of Linguistic and Acoustic Features of Suicidal Adolescents Speech	Rachel McCourt
4/11/2014	Automatic Detection of Omissions in Medication Lists	Qi Li	Read the article.	View the presentation.
4/18/2014	Using Twitter to Examine Smoking Behavior and Perceptions of Emerging Tobacco Products	Ni Yizhao	Read the article.	View the presentation.
4/25/2014	Automatically Annotating Topics in Transcripts of Patient-Provider Interactions via Machine Learning	Haijun Zhai	Read the article.
5/2/2014	Towards comprehensive syntactic and semantic annotations of the clinical narrative	Todd Lingren	Read the article.	View the presentation.
5/9/2014	Regenstrief Institute's Medical Gopher: A next-generation homegrown electronic medical record system	Judith Dexheimer	Read the article.
5/16/2014	Composition of semantic relations: Theoretical framework and case study	John Pestian
	Summer break
9/5/2014	Learning part-of-speech taggers with inter-annotator agreement loss	Benjamin Glass	Read the article.	View the presentation.
9/12/2014	Faryal Lit review	Faryal Mallick
10/24/2014	A Case-Based Reasoning System to Support the Global Software Development	Judith Dexheimer	Read the article.
10/31/2014	Medication Reconciliation	Ni Yizhao		View the presentation